YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30260380, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKVVPVVA SVLGASLLLT ACGGNKDNAS GAKANDKAPD KQAINLSFAS EIPTMDVAKA  60
   61 TDGESMNVMR NVFEGLYAMG EDNKPIPGVA ESVDVSADKT KYTFHLRDSK WSNGTPVTAK 120
  121 DFVFAWQRAV NPDTAAEYAF LFFDIKNAKQ INQKQLPVDQ LGIKAVDDKT LEVQLDRPVP 180
  181 YFLSLTTFST FLPINEEYLK SQGDKYGLET NHLIYNGAFT LDNWKHEQSF QLKKNPNYWD 240
  241 AKTVKLEEIN FNVVKDKSTE VNLYDSGQID RVALTAEFVD KYKGDPNFKE RAEVGIQFLR 300
  301 LNQKNETLKN QHARLAINGA MNKKAYVETI LNNGAVPAEG MIPAKFAKSP DGNDFRKENG 360
  361 NLVKDDVKTA KENWKKAKQE LGTDKVTIEL LTSDNALAKK TGEYLKGELE KNLDGLTVNL 420
  421 KPQPRKQQLK LLLSGDYEIG IDGWGPDFAD PITFLDLFTT DSAYNFDKYS NKEYDELIHK 480
  481 VKTDLAGDEK ARFEAMKQAE KILLQDGAVA PLYQQGRSYL QRSFIKGLVT TDFGGEFNYK 540
  541 WTEVAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle