YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30260340, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFFFITSKR NFKHISLIVI LSLFTAWLLF LKTYSHESAF STATGPKVIY KGDTSKKQVA  60
   61 FTFDISWGDK KAIPILDTLK ERDIKNATFF LSAAWAERHP DVVERIIKDG HEIGSMGYNY 120
  121 TSYTSLETNE IRRDLLRAQD VFTKLGVKQI KLLRPPSGDF NKATLKIAES LGYTVVHWSN 180
  181 NSNDWKNPGV NKIVSTVSNN LKGGDIVLLH ASDSALQTNK ALPLLLQKLK SDGYEQISVS 240
  241 QLISNTSTKS KDVQ

Type	Start	End	Confidence
Signal Peptide	1	35	0.69
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	254	0.98