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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4063002, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSYSSNGG YGYSSSSFQP KHRRSDSTSF LDDLRAFLAH SSRSAWRFWR ERGRFIAWAA  60
   61 LVNAGRRLRM NLTYNRLFSF PHLLVAAWIV VLLWGERWVF HSAVEECEWG NWERWPPGAN 120
  121 PHRLVLVADP QLIDPHSYPG RPWPLNPLTM TIVDNYIRRS YTQMQSQLDP DTIFFLGDLF 180
  181 DGGREWKTAH GDFRDPEWGP HPKDEQKYLK SWNKKYNEFY WLKEYARFGE IFFTPWLEAG 240
  241 QKPENEHKRR KLIASLPGNH DLGFGAEIKL PVRNRFEAYF GEGNRVDVVG NHTFVSVDTV 300
  301 SMSAASLSEI ARQDVQPIYK PTEHFLNQVK WTKQKAVEKE LRYLRGEVPE VKLHHRIEEL 360
  361 NQANFKDQPH LVHDENSQKV PDLPTILLTH VPLYRPPGTP CGPKREHWPP TPPPKGQTEP 420
  421 VFPDHRNAIS VYRGYQYQNV LDEKQSISLI EKIGNVIHAF SGDDHDYCEV VHAPDQGSVR 480
  481 EISVKSISMA MGVPTPGFQM VSLYNPLDPV TGKPLAGDGQ PTMQTHLCLL PNQISTYLHY 540
  541 VGLGIFCIIL LAIRAFLVPV LNLPRFALDS DSDSSHHHPS GISILPVFKA KQEDYDEYSL 600
  601 PSAGYSASSK YGSSGTSGER RSRTASVSSS SLKSNNLRNG HHNEKSGGSS GRSRKSSVYS 660
  661 NSNKSVKGGW SWGGKHGHHH HYHQPRIEIP GENEEDLYYG GAFTTSSSSS KWRARQSRKK 720
  721 QKPKTAMGVV VTELWTTVWR VAWMVVVVFG WLAWKG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle