YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32414287, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSMSQAYA APPSIPNTST EKPHYDAPTA ATAGTTYPQA DPTTGATAAA GTTPATNRPT  60
   61 TASTYGNEKS VATTPAVTKT RFGASDIILF ILAIFIPPLA VFLDRGFKVD FWINILLTIL 120
  121 AWFPGVIHAW YVLFRHPTGR D

Type	Start	End	Confidence
Cytoplasmic	1	81	0.95
Transmembrane Helix	82	103	0.88
Non-Cytoplasmic	104	110	0.83
Transmembrane Helix	111	134	0.90
Cytoplasmic	135	141	0.94