YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32414209, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRRSLFKAI RASALRRSIP ATTRRCFASS SVRFADGTLP LEGYRVLDMT RVLAGPYCTQ  60
   61 ILGDLGAEVI KIEHPVRGDD TRAWGPPYAS YKSGSSMEGP GESAYFLGVN RNKKSLALSF 120
  121 QDPAGVEILQ KLAAKCDILV ENYIPGSLKK YGLDYETLRQ INPALIYASI TGYGQTGPYS 180
  181 KRAGYDVMVE AEFGLMHITG NRDGPPVKVG VAVTDLTTGL YTSNSIMAAL LARAKTGRGQ 240
  241 WIDACLSDCQ TATLANIASS SLISGKKDSG RWGTAHPSIV PYKAFETKDG DILFGGGNDR 300
  301 LFGILCDGLG RPEWKDDPKY KINAQRVANR VELEAEIEKI TKTKTTQEWL DVFEGKGLPY 360
  361 AAINDILTTL THEHTLARNM VVEVEHEECG PIKMVNSPVK YSETTPTIRS PPPTLGQHTD 420
  421 EVLRDHVGLS DEQIRQLREK GVVR

Type	Start	End	Confidence
Signal Peptide	1	37	0.66
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	444	0.99