YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28924208, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRSALQSV CRTTAAAASA SARSSLAGRH AFSTSARFQL QPPPNPYVSG KSRIETLRAA  60
   61 LSNRKPAAGA AAGGSPGATS ASSALPPRPP TANDSPWSIV DAINKDSNSS TSSSSSSSSS 120
  121 GGALYSSSKP SPMQTWNETD FETRHMAPQQ ELNIRLRPST GRTFYVSGHQ DFAGALKLLH 180
  181 RTVAANKVKK DVRLQRFHER PALKRKRNLR ERWRARFKEG FKAAVNRTFE LKNQGW

Type	Start	End	Confidence
Signal Peptide	1	27	0.90
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	236	0.99