YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30259902, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITIIGTGY VGLITGVGLA VLGHSVTCFD INDEKIERIK QGDLPIYEAG LYELIHDACE  60
   61 NNRLTFTTSK EEAFKDAEFI FIAVGTPSLL DGTADLTYIQ NACVDIGTYA TKDIIVVTKS 120
  121 TVPVGTNGAM RGWIEETLQN RHELHIVSNP EFLREGSGIY DFFQGDRIVI GADNEEAARK 180
  181 VENLYSELHL KTYVTDIKSA EMIKYASNAF LATKISFINE ISNICEKVGA NVLDVAKGMG 240
  241 MDKRIGASFL NAGIGYGGSC FPKDTKALVQ IAGNVAHDFR LLKAVIEVNN KQQLLLIEKA 300
  301 KKVINMNKKR IAVLGAAFKP NTDDIRDAPS LIMIQELINL GADIVLYDPK AIQNMKNIFG 360
  361 ETIQYSECID ESIRGASAAF IMTEWEDIRT YPLENYVQLM REPILFDGRN CYTNEDVKKQ 420
  421 GIDYYSVGRE SIYKRDFSVI R

Type	Start	End	Confidence
Signal Peptide	1	23	0.58
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	441	0.98