YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30259056, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWDFPKKWLG LVAIIGIVLF LLFWKTNEHT ERSVITTDVQ AKEIEKKSKP KISDTKLQKK  60
   61 IIVIDMKGAV VKEGVYEMKE GDRVKDAIEK AGGFLPEADR KKVNLAQVVQ DQMVLYVPDK 120
  121 NEQVQEGAAV SKGEEKVRIN AASKEQLEKI TGIGSRKAES ILKYREEHGP FQKIEDLLEI 180
  181 DGIGVKSLEK IKDQIIIP

Type	Start	End	Confidence
Cytoplasmic	1	7	0.64
Transmembrane Helix	8	26	0.89
Non-Cytoplasmic	27	198	0.73