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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30264201, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAGATLAIG VMAPQVLPAT AHADEKTGES TVNLRILETS DIHVNLMNYD YYQTKTDNKV  60
   61 GLVQTATLVN KAREEAKNSV LFDDGDALQG TPLGDYVANK INDPKKPVDP SYTHPLYRLM 120
  121 NLMKYDVISL GNHEFNYGLD YLNKVISKTE FPVINSNVYK DDKDNNEEND QNYFKPYHVF 180
  181 EKEVEDESGQ KQKVKIGVMG FVPPQVMNWD KANLEGKVKA KDIVETAKKM VPKMKAEGAD 240
  241 VIVALAHSGV DKSGYNVGME NASYYLTEVP GVDAVLMGHS HTEVKDVFNG VPVVMPGVFG 300
  301 SNLGIIDMQL KKVNGKWEVQ KEQSKPQLRP IADSKGNPLV QSDQNLVNEI KDDHQATIDY 360
  361 VNTAVGKTTA PINSYFSLVQ DDPSVQLVTN AQKWYVEKLF AENGQYSKYK GIPVLSAGAP 420
  421 FKAGGRNGAT YYTDIPAGTL AIKNVADLYV YPNTLYAVKV NGAQVKEWLE MSAGQFNQID 480
  481 PKKTEEQPLV NIGYPTYNFD ILDGLKYEID VTQPAKYDKD GKVVNANTNR IINMTYEGKP 540
  541 VADNQEFIVA TNNYRGSSQT FPGVSKGEVV YQSQDETRQI IVKYMQETPV IDPAADKNWA 600
  601 FKPIVADKLN TTFDSSPNAQ KYIKKDGNIS YVGPSENEFA KYAIDITKKN DDDKETGGEN 660
  661 PTIPPTGEGD NGENPTTPPT GEGNNGENPT TPPTGEGNNG GNPTTPSTDE GNNAGSGQTT 720
  721 TDNQNSKETT TVSENKEERD LPKTGTNVAS TIGAGLAFIG AGFLLLFRRK KANR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle