YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30258807, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEIMIRICA ITKADEVLYD VSLEETKKDH IVWYWLDLYK PTKEEYTYIL QDHFKFHPLA  60
   61 IEDCIEYVQR PKVDFYDGYN FLVLHAFGED GLEPHEIDLF ISDRYIVSFH FSHNNAIERV 120
  121 WKTLGEKKRI KNSPLHVAHT IIDQIVDDYF APVYYIEDHL NAIDDNLTGE TAGSVLEEVF 180
  181 DIRADLSKLR RTIIPMRDLL YRILNSTRFY GISDHEIYFK DIHDHLLKLT EMIEASRELT 240
  241 ADIRDSYFSL NSHHMNNIMK TLTVFSTIFM PLTFIAGVYG MNFEHMPELG GQYSYFICLL 300
  301 IMALIGGGMM VWFYKKGWFK

Type	Start	End	Confidence
Cytoplasmic	1	260	0.98
Transmembrane Helix	261	281	0.92
Non-Cytoplasmic	282	292	0.84
Transmembrane Helix	293	314	0.95
Cytoplasmic	315	320	0.93