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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30263574, gi|...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGITKEYKKH ASLQPNKIAI KENDRVLTYK EWFESVYKVA KWLNEKESKN KTIAIVLENR  60
   61 IEFLQLFAGA AMAGWVCVPL DIKWKQDELK ERIAISNPDM IVTERYKLND LPNEEGRVIE 120
  121 IDEWKRMIEK YLPTYFPIEN VQNAPFYMGF TSGSTGKAKA FLRAQQSWLH SFDCNVHDFH 180
  181 MKREDSILIA GTLVHSLFLY GAISALYVGQ TVHIMRKFIP NQVLDQLETE NISVMYTVPT 240
  241 MLESPYKENR VIENKMKIIS SGAKWEAGAK EKIKNIFPYA KRYEFYGASE LSFVTALVDE 300
  301 ESERRPNSVG KPCHNVQVRV CNEAGKEVQK GEIGTVYVKS DQFFMGYIID GVLARELNAD 360
  361 GWMTVRDVGY EDEEGFIYII GREKNMILFG GINIFPEEIE SVLHEHPAVD EIVVIGVEDS 420
  421 YWGEKPVAIV KGSATRQQLK RFCLQRLSSF KIPKEWYFVD EIPYTNSGKI ARMEAKSIIE 480
  481 NQEKIYE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle