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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30257132, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHTKIKKWG FFAVLSIVGL ILLILFKINF ISITIATSSA ERGKIFDQNG VILATNKKVK  60
   61 SLYCTSNDEK LSKQDTSNTL AFFEQFSSKF QHDISSESIK SQLQQSCKKQ TMHDIPLYSD 120
  121 IAENELAFID KNKPNNVIIK DEWIRYYPKH EIGSQVIGYV ENNLNSKHMP VGKSGIELQY 180
  181 EDDLKGKPGK TLIFKMNNKE FLWNIQKVQK GKDIRLSLDS KLQQKSEEAL RSQIKKLPDA 240
  241 KAGYAVVSDA KTGAILTMAN SAVFDPNILH THVSTKIDNL KSLSQNKAIQ KLKYGESYIN 300
  301 MASTIKPLTI LIGLNEKLFQ PEDTYLDKGT FEYDNQNNIT NAPGTPTGEI TPRQAIINSS 360
  361 NTFMTAKVAL PLFNQHNGNV EKVAHIWTDY LMQFGLRSKT GIDLPFEEDG QYEFHPSNKF 420
  421 ENGISALLNA SWGGNEVHTP LQLAQYAATL ARKGDKYKPQ MTSAIIGQNG KETKKFKPIL 480
  481 ESSNRYPTKF WSVVQGGMSQ NIEEIKKLPF DVAGKTGITG FPDEQARMIN HSLFIAYAPT 540
  541 EDPQIAVSVV IPGSNSEKNI AALVTSEILE SWNTLQKENK NKKEGSLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle