YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261813, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIPITVLS GFLGSGKTTL LHHILTNKNN LKVAVIVNDM SEVNFDASLI KKGGFSRTEE  60
   61 KLVEIQNGCI CCTLREDLII EVNRLVENGD IDYIVIESSG ISEPIPVAQT FTYTDDVLNI 120
  121 DLTKNCRLDT MVTVVDANRF WDDFADGESL LDRKQAINEN DTREVIDLLI DQIEFANVII 180
  181 LNKIDLLEKE DVIELHQLLQ KLNPNAKIIE SSFSNVPLQE ILNTNVFNYE EASQSAGWIQ 240
  241 ELNSEHHTPE TEEYGINSFV YRRKYPFHPE RLMNWLEKWP VDVVRAKGFF WLASRNNMIG 300
  301 LLSQAGSSIT IQGAGEWIAA LPETERNQMI IEEPEVLKNW DKQYGDRITE LVFIGIDMNR 360
  361 SLIEQSLDDC LLTEKEMTQN WNTFIDPIPA FTYTS

Type	Start	End	Confidence
Signal Peptide	1	18	0.69
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	395	0.99