YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30261645, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDNYRSRTE RNHVKNQKQE TNKEKKPKKK GSFFKKFLIG CLLLGIVGLV AGVSAFFVMV  60
   61 KDAPKLDKSK LVNPLSTKFL DKDGNFFYEY GAEKRTHVTY DQIPKVVENA FLATEDSRFY 120
  121 DHNGIDFKRT TKAVMENVTG GFGSQGGSTI TQQVVKNYFL TMDKTAKRKV QEWYLSYKLE 180
  181 QQYSKHEILE MYLNKINLGN RSYGIATAAQ KYYGKDLKDL QLHEAAMLAG LPQGPNIYDP 240
  241 TKKENVERAT NRRNVVLSLM NRHGYITKEE MNNAVKIPVT EGLQPSSEIT EMKYQAFLDA 300
  301 VVKEVEKEYP DVNIGSDGLT IHTTLDQDAQ DYAEKIMDGN LIKYPNDQFQ GSFVFMDTQS 360
  361 GEVRAIGAGR KGSKSTFKGH NMATDLKRQV GSTMKPIFDY GPAIENLQWS TYHQLNDSEY 420
  421 TYSNGKKIRN ATNSYKGDVS LREALKKSLN IPALKTAQAV GLPKSQAFAE GLGMTFKDGK 480
  481 TFESTAIGSN DSSPLQLAGA YAAFGNGGNY NKPHFVKEVT FPDGKKKSFK PKEQRAMQDY 540
  541 TAYMVTDVLR DVVKPGSGGT GPTAYVSGVD VAGKTGTQNF DADVIKEYGI PADANRDSWF 600
  601 AGYTPQYTMA VWTGYEKNGP ENYISDRYTR IAQQMFQVMM SKFATDKTRF ERPSSVQEIN 660
  661 GELYVKGAKK DAIKQIKVDA PSGLNVTFDG ASTVTLNWSG PTEVDAYAAS YKATDGSSGS 720
  721 LSVKGTTATL GGIKPGVTYS FSVVAKKGTG TSPAVGASFT APGGTPDAKK AEEEAKKKAE 780
  781 EEAKKKADEE AQKKANEDKL KQEEATKKAE EEAKKQQEQQ RKQQEEAQKK AEEEARKKAE 840
  841 EEAKKQQEEA QKKAEEEARK KAEEEAKKQQ EQQQQEQQQN TGGNTPHADG NFVTTES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle