YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261383, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKKKLGMG VASAALGLSL IGGGTFAYFS DKEVSNNTFA AGTLDLTLDP KTLVDIKDLK  60
   61 PGDSVKKEFL LKNSGSLTIK DVKLATKYTV KDVKGDNAGE DFGKHVKVKF LWNWDKQSEP 120
  121 VYETTLADLQ KTDPDLLAQD IFAPEWGEKG GLEAGTEDYL WVQFEFVDDG KDQNIFQGDS 180
  181 LNLEWTFNAN QEAGEEK

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	197	0.99