YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261209, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKKKYMNAF VIAATLAVPF SSIMAPIAKA EAAVEMKAAS KLADGTYDVI LKTYKDKTND  60
   61 TSVASTYLKN LKVTIQGDKK IVTLTVQDSS YFQYLRVEDT NKVGTFHDVK VISEDKANNG 120
  121 TKVVQFEIDE FSKKYNMQMH ILIPAIKYDH KYQVQFEIDA SAIEQKPKFS DVPTWAQESV 180
  181 QYLVDKEAVH GKPDGTFAPA ESIDRSSAAK ILATVLRLEI KKDAKPSFPD AQNHWATPYI 240
  241 AAVEKAGIVK GDEKGNFNPS GLINRASMAS MLVNAYKLER NENIKLPKEF ADLNNHWGAK 300
  301 YANILIQEKI SIGTDNGWAP NKAVSRAEAA QFIAKADKLK KEMK

Type	Start	End	Confidence
Signal Peptide	1	30	0.97
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	344	0.99