YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30260888, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPVVVKEKR VNESHIHAVE DEVRQAKTMD RDIVKHAMKQ SVAKLNPKVM IKNPIMFVVE  60
   61 IGFVITFILS FLPSHSSSIP GWFNITVSLI LLFTVLFANF AEALAEGRGK AQADSLKQSK 120
  121 KDVFANVVKE NGEIVQVSAT DLRKDDVVIV KQGEMIPSDG EVIKGLASVD ESAITGESAP 180
  181 VIKEAGGDFC SVTGGTMVVS DEITIVITSN PGKSFIDKMI SLVEGAARQK TPNEIALNTV 240
  241 LTSLTLIFLI VVVTLPIFTN YLGFQIDTAV LVALLVCLIP TTIGGLLSAI GIAGMDRVTK 300
  301 FNVLAMSGKA VEAAGDINTI ILDKTGTITF GNRMAHTLLP VGNETIEQVG KWAAISSVLD 360
  361 ETPEGRSVIE YVQAKSISYN RELAEQGEFI PFKAETRMSG VDLQDGMKVR KGAVGSVIEW 420
  421 VRSQGGTIPK DVNQKADFIS KEGGTPLVVA VDNRIYGLIY LKDTVKPGMR ERFEQLRQMG 480
  481 IKTVMCTGDN PLTAATIAKE AGVDEFVAEC KPEDKIAVIK AEQDKGKLVA MTGDGTNDAP 540
  541 ALAQADVGLA MNSGTTAAKE AANMIDLDSN PTKIIEVVGI GKQLLMTRGA LTTFSIANDI 600
  601 AKYFAIIPAM FTLAIPQMEA LNIMKLTSPL SAILSALLFN AVIIPLLIPL AMKGIAYKPM 660
  661 SSNALLGRNL LIYGLGGVIV PFIGIKVIDI IVGLFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle