YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30260863, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMKKGIKFS LAALVVAGSL VGCGKAEETS GKDAKGSDNA KQELSGTIAA AGSTALQPLA  60
   61 EEAGKKFMEK NSNVSIQVQG GGSGTGINQV ASGAVQIGNS DVPSADKIKD ADKAKELVDN 120
  121 KVAGIAFALV VNKDVKVDNL TVQQVQDIFT GKVTNWKEVG GKDEKINVIN RPASSGTRAT 180
  181 FEKTIMKDAK INDGTGTTQD SNGAVEQAIN STPGSVSYLA MSYMVGEKKG ALQTVKIDGA 240
  241 EPKVENIASG KYPFWSYEYM VTKGEAKEAT KAYIDYVKGK DFEKQVEDMG YIPMSKLNK

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	299	0.99