YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30260828, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVWNVKGKL LKGVLSFGIG LGVLYGGSSA QADTSTDQNN TLKVMTHNVY MLSTNLYPNW  60
   61 GQSERADLIG AADYIKNQDV VILNEVFDNS ASDRLLGNLK KEYPNQTAVL GRSNGNEWDK 120
  121 TLGSYSSATP EDGGVAIVSK WPIVEKVQYV FANGCGPDNL SNKGFVYTKI KKNDRFVHVI 180
  181 GTHLQAEDSM CGKTSPASVR TNQLKEIQDF IKNKNIPNDE YVLFGGDMNV NKINAENNSD 240
  241 SEYASMFKTL HASIPSYTGH TATWDATTNS IAKYNFPDSP AEYLDYIIAS KDHANPSFIE 300
  301 NKVLQPKSPQ WTVTSWLKKY TYNDYSDHYP VEATISMK

Type	Start	End	Confidence
Signal Peptide	1	32	0.94
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	338	0.99