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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28920643, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKLPAFAL FPLAALRDQL LPDEWIACLD AWLVLIDSHL SLPDATFLSI SARDESLTAF  60
   61 LTSFAHQTAL GSTSILGPSQ SAKRLLKDSF LLTSRLLRSS SPPVPLTQWE FLSDFCRVYG 120
  121 KKRSSELLSS LSEPAQKSLD ASLSALKKVL IKNLDLGLQE GGDLKGVEQR LDRVNDLIGS 180
  181 SPQVASFFLA GSDFLDGLVS CYKIMNPPLR KVIIATTYLC MVGLADGSQD QKLSALTDQL 240
  241 YSLKAAADAH KAGPTNVNDS LVAELVTSTP LLQQLQRKLE SVGSGNIRTK SVLKELAAFK 300
  301 KPGGGIPRPK RLVNRQRKAI DKGKGKDLSS LEDTQHQEIH IHRMSQISQI QDLFPDLGSG 360
  361 FISKLLDHYS SDTEQVVACL LEDSLPPHLQ SADRSAPLAP PSPKQPKPQG HLRSPKSTPP 420
  421 LPPTRGTTTA TNPLVDDDDF LLSVPASQLQ LGKRTDTSAD LLLSAPPTTS NPTYKSRILS 480
  481 ALAAFDSDDD ERDDTYDAAD VGGTVDAATV AAGVEDIRLQ DNQPSQGGGA GGLAEATEAV 540
  541 LYEVWKTRPG VFGRDAETRR GRERKELRDK TGLSDEAVEG FGVMINRDKN MKRKLERKFG 600
  601 EGAFSGQQVE IQTTRWRDHR GGEDGDGETD TDGGGGDGPS RGGGYGGPRG GRGGGGGRGR 660
  661 GRGGRGGGGG GGGGRGGGEA GGSTGQGGPE SDLAKRRKEA NKGSRANHNR RDQRAKKMAR 720
  721 GGFGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle