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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32413367, gi|...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPPPSTPT QLLRLRLTRS ALSRSAVSTT SPLATSTCPS SQRTVSTKVG AATITPGLRF  60
   61 QSLLFPPSTG ITTTTTTTTT AFFSRNNLST STTTVNKRDQ TVKPTVTLAP STPVVLRASV 120
  121 TGLGLLFVLG LGLGYGITGF LGQKSTEQQE LPSEASYTTI QNNIQDILDD ESSTTNMSRE 180
  181 IAPGRPGNLT PEQEEKLKQL WKLIFQVCGV SSPSPSSESS TPAATSDDVS IKGDDKKKKS 240
  241 KLSMFSRKHK KDSDDTTPDS ASTASGSMPG SPAIVLNAST TSGDDDKYNQ LSKFHETLAS 300
  301 QSPAAIRETI WSMVKHDHPD ALVLRFLRAR KWDVEKALVM FISTMNWRDN EMKVDADIMR 360
  361 SGEGGAAEAE KMEAKTSEEI AKKKLAIDFL TQTRMGKSYV HGVDKQGRPI CFVRVRLHKQ 420
  421 GEQSEESLER YTVYLIETCR MLLQGSVDTA TIVFDMTGFS MANMDYAPVK FMVKCFEANY 480
  481 PECLGAVLVH KAPWIFQGIW RVIRGWLDPV VANKVHFTNN ISEMSEFISP EKLPKDLDGQ 540
  541 EDWEYKYVEP VPGENDRMKD EETISKLQAA RAELVKEYEE ATLQWIQASG NSEELKKKRD 600
  601 AIAEKLRVDY WNLDPYVRAR SFYDRIGVLL PGGKLDPFLE GKKDGLAVRV VGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle