YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28925319, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSSLTPARR QATTTSWRDR LLTLLMALTF VLSSLASPLP IEGAVVKANN NDAVSQPQAQ  60
   61 AQAKAEVRQF SAPAQAQEAE PATATTSDDT TNTNTDDDDP LLPERKYFHE PGWTEELSHY 120
  121 DTRFFTSPVP YDPHLVHLRH LIRSYLLMTS SRSLTTWLAH GTLLGWYWNG AIMPWDYDLD 180
  181 VQVSNITLGQ MARDWNQTTF DYVYTLSEEE EKEGLGKQGE VTVKKYLLDV NPYWAQRTRL 240
  241 EGMNVIDARW IDMENGMYVD ITGLSEDREE TGTRQGVWSD KNYHGYGTRQ IWPLRRTEFE 300
  301 GVEAWVPWDV EEILKEEYGV KSLTEESFAG HQFDHGRKQW VKTELA

Type	Start	End	Confidence
Signal Peptide	1	36	0.99
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	346	0.99