YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28925203, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRITQRMA LKRALARPSP CAKGRAQPQR RSLTSAPRPG DGPLMERRAD RELPDVQTSR  60
   61 FRWSRTFPIF LGIVAATSIA IFNYQKLSSP VVESTLYALR TNQRAREYLG DEIYFKAQIP 120
  121 WISGEMNQLH GRIDIKFNVK GTKRTGVMRF ASFRPTPRGM FETTEWSLET EDGKVIDLLE 180
  181 EGDPFRAING RAMEPELDDD AEDAKVRGFR QMPK

Type	Start	End	Confidence
Cytoplasmic	1	65	0.89
Transmembrane Helix	66	84	0.87
Non-Cytoplasmic	85	214	0.98