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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47092136, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDWKIKIQT FLSKNYGFFV LAVILYWLKT YIAYQLEFKL GIENLMQQIL LFINPLSGAI  60
   61 FFMGLALFAK GRRSFIWIIV IDFLMSFILY ANIVYYRFFS DFITLPNLNA KQMQNMGDMG 120
  121 SSITALLSWH DIIYFADIII LIALLAFRFV KPNKTARIRA RKVVGVLTLG IAMFFGNLGL 180
  181 AEIDRPQLLT RTFDRNYIVK YLGMTNYQIY DAVKSTESST QRALADSSDV TEVLNYTKSK 240
  241 YAAPNPEYFG KAKGKNVIYI HLESFQQFLV NYKLNGEEVT PFINSFFKDQ NTLSFTNFFH 300
  301 QTGQGKTADS EMLLENSLYG LPQGSAFTTK GQNTYESASA ILGQQGYTSA VFHGNYKSFW 360
  361 NRDEIYKQFG YDNFFDASYY DMNEADVSNY GLKDKPFFKE SEEYLSSLQQ PFYTKFITLT 420
  421 NHFPYPIDEK DASIAPATTG DSSVDTYFQT ARYLDESVKS FVDYLKKSGL YDNSVIIMYG 480
  481 DHYGISDNHE EAMTKILGKD YNTFENAQAQ RVPLMIHVPG VQGGVQEQYG GQVDLLPTLL 540
  541 HLLGVDNKEY LQFGTDLLSK DHKQLVPFRN GDYITPTYSM IGGNMYNQQT GEPIATETKE 600
  601 MKETKEKVAK ELELSDSVLQ GDLLRFYAPD GFKKVDPSKY NYNKKKSTDS SDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle