YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11595646, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIARPVRAL ALAAALVWCF FIWQLLSPSG TAMTKDKYLS FERDPNLDPT GEPEGKLIRA  60
   61 SEDYAPGAKN SARINATLLA LVRNEELEGM LQAMRDLERT WNHKFNYPWT FFNDVPFSDE 120
  121 FKKRTRAVTK AEVRYELIPK EHWEMPSWIN QDLYHESVKI LEEKKIQYAD KISYHQMCRW 180
  181 NSGMFYKHPA LANTQYYWRV EPNVHFFCDV DYDVFRYMHD NNKTYGFTIN LYDAPASITT 240
  241 LWPETEKFLA EHPEYVHENS AMNWLTDKTR RPDHTKDANG YSTCHFWSNF EIGDMNFWRS 300
  301 KAYEDYFNHL DRAGGFFYER WGDAPVHSIA LGLFEDSSKI HWFRDIGYQH IPFFNCPNSP 360
  361 KCKGCVTGRF TDGEAWLNRE DCRPNWFKYV GMG

Type	Start	End	Confidence
Signal Peptide	1	32	0.97
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	393	0.99