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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32412674, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLAEPEIS LPVSGLSHKS EGAPSTDGEA ILTPDTPSTP PLNSSPGEHD PNTPTLDVTT  60
   61 PKSPAVLSRN SSFSGSISST LHDEWDVFPP LDRLTVLDLL DNFALPQQLE KLQRGIHART 120
  121 EKMRKSGEAL KEKSAIARER MVDEWRKRVP TAEEQLERYK KRMRVNVDKL GKRWNDTKVI 180
  181 TLREKVAFIF GVMNIFISGY LIGAFPEWFH IWYTVQILYF MPIRFYRYHK QGYHYFLADL 240
  241 CYFVNFLLLL SLWVFPGSKR LFTAVYCLAY GNNAIAIIMW RNSLVFHSLD KVTSLFIHIM 300
  301 PCATLHCIVH LLDPAEQRKR FPSIWTIKTS PPGSPTAYAN VISMLAWSTI PYAIWQLAYY 360
  361 FFITVRRRDK IAAGRPTSFT WLRKSYSKNW LGKAILNLPD SLQEPAFMLI QYTYAVLTML 420
  421 PCPLWFYYRW LSAVFLMGVF TWSVYNGSTY YIDVFGKRFQ KELEAMKAEV AKWQHSPDGM 480
  481 VHSPTLTPHA GAQEEENKRL GEPTKNNNNS DSNDSSGSST SSLDNIPLLT EEKSELPASA 540
  541 TATATGAEVD GGAKDVARAR RPGAELFGAG AAPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle