YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|241909539, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSLWTAAT GMVAQQLNID VISHNLANVN TSGFKKSRAE FEDLMYQNMR IAGSATEGDS  60
   61 RIPVGIQVGM GVRPTAVHKF FSQGDFQNSG NPLDIAIEGD GFFQVLVNGE PRYTRAGAFK 120
  121 LNQDGTVVTA NGYVLQPEFT VPAETKNVVV TEAGHIAALD ANGQELAAAD IPLYTFINPA 180
  181 GLDAIGRNLY VPSEASGEAV EGVPGEDNVG TLAQGFLEMS NVEVVDEMVN MIVGQRAYEM 240
  241 NSKAISTSDQ MLQTAVNLKR

Type	Start	End	Confidence
Signal Peptide	1	16	0.58
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	260	0.99