YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46445975, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYMDCLAYC TASSYQIKPL FESLKHQGAT LYRDVVHLPI PGISIGDIFY FSYGATVCWG  60
   61 VTPDQCQQFL DQAKAYEEQP LIPEEMDIDE FTFTFGDVPK IIEDEIILPN RDVLNRLAIS 120
  121 HGLAQSVKLG TFEHAIRRTF QFTKRIPQDL AKQGKIPLSR KEIRKKMGAL FIERNSINLH 180
  181 LDILDTPEFF WEYSELEPLY AMTNNYLDID TRVEVLNQRL DVMHELFEML GNELNHQHSS 240
  241 RLEWTIICLI VIEVFLSIWR DVFHFI

Type	Start	End	Confidence
Non-Cytoplasmic	1	241	0.67
Transmembrane Helix	242	263	0.63
Cytoplasmic	264	266	0.37