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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32412097, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDVCMEDGR RPSNFGLCPP RRRGRDPVAA ENLEVFPFMG FLGGGMACHW SAPKGAVQSD  60
   61 HPSHVAHHPA LPVLPCDACR CRMEAFWAVQ CQPKKEKRIC GCLMTKQPKI GLCTFQEAAK 120
  121 ACRDEDVYSG LALYNLSRWH SSTVSLDAGP VVSKCDDVQL KSGNSSKMLR RYLANCTCRV 180
  181 QKAGTPLVGP HLISPGLHNA GATFPLPLCL VALPVLFCLS LRHQPSFTPY TTLPSFSHTF 240
  241 FLFCKSKELR PQLRSPSPSS IVPLPLPASS PPFFQKYNLS PSIPIPYNLL PPWVCLPHTL 300
  301 TGRTETKPDP HCRDDEISHP SAPFASSSTN PRFSSTRSFQ LWKRDTDQRY IWESSFDYQL 360
  361 SSTLHRNQQT RKSPKPNKMR FSITRPLAAL ASIAALVSPV FGEQKLASQA LKTCQANSGF 420
  421 SASLFNVVYT PESGRANVDI VAVSTIQGKI IFDVAISAYG YEIITAKVDP CSSGLLGLCP 480
  481 MTAGKIPLNF TLPVDKNAVA QIPSIAYNFP DIDAKVRVRI NMTDGDEAGQ TVACVEAEIT 540
  541 NGKTVDLAGV KWATAIVATF ALTSSAFVSG LGHHNAASHV AANALSLFGY FQAQAMLGLT 600
  601 GVPLPPAVMG WTQDFQWSMG IIKVNFMQDI FTWYQRATGG TPSMLFDSLA TVSVQVQKRA 660
  661 LDVADYGADL ARRSMSYMPR TISEPMEQAM KHELLKRGNI QTDTGSYVVY GIQRAAFRAH 720
  721 IESTNLFMTC LIFFCVLVVI TILCVAGWKG YCELAAQKGW MKHDTFLDFR NGWFTVLKGI 780
  781 LFRITLIGFP AMTVMCMWEF TQNDSPAEMV LALFFFLGML VTLGWAAFKV IRIARRSVVM 840
  841 HQNPAYILFS DPQALNKWGF LYVQFRASAY YFIVPVLGYT ILKGLFVAFG QNNGTAQAVG 900
  901 FLIIEAAALI AATVMRPWMD RKTNWFNIAI CVMNFINAIF LLMFTEVFNQ PPLVTGVIGL 960
  961 ILWITNSIFS LVYLLMLICS TIFVFFRENP DNRYQFMADD RTFFMKSQTH LTTTTELDAL1020
 1021 AATARGDKSG FKGLDLDDDA ESMSSDSLRR QTELQPGMPA GGAGLHFTNA PPKSPVDPAM1080
 1081 PLFPSEGRNT QGPQYGEKPG MNFDPRGPSP SPYGGPQGGN ATLTPQYRAL NNASPWQRGA1140
 1141 GYEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle