YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32411831, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGSARYVR YILLAFFVIA VLYFISTPSS VVTPLKDNFG KFQQSTGNSK PSTGSTTGST  60
   61 AGSTTGGTTE VAHDEKTPAK SNGADYDPAQ YPLAMTPNDP GWNDLSGVKG GPRMNATFVT 120
  121 LARNGDVWEI AKSIRSVEDR FNRRYNYDWV FLNDKPFDET FKKVTSSLVS GKTYYGEIPT 180
  181 EHWSFPPHID QEKAKKVRED MRQRKIIYGD SISYRHMCRF ESGFFFRQPL MMNYDYYWRV 240
  241 EPSVEFHCDI HYDPFRFMHE NNKKYSFVLS LYEYFETIPT LWDSVTKFIK NHPEHIAEGN 300
  301 SMAFLSDDGG KTYNKCHFWS NFEIGSLNWL RSKAYTDYFE SLDQDGGFFY ERWGDAPVHS 360
  361 IAAGLMLKKE EIHFFNDIAY YHVPFTHCPT GEQFRLDRKC HCNPKENFDW KGYSCTSRYY 420
  421 ELNGLPKPEG WQDQSD

Type	Start	End	Confidence
Cytoplasmic	1	7	0.87
Transmembrane Helix	8	27	0.83
Non-Cytoplasmic	28	436	0.99