YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28918430, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLRSITQE KWAWICHHIG FRPRKLMTEG HFQYQTVHYT LIIGLTIVGS ILIYASHRGQ  60
   61 VAYVDALFFA AGACTQGGLN TIDVNLINTF SQAVIFLLAM LTNPISIGYY TVSLRRYWFE 120
  121 KKLQTIVQDA KQRRGTISKS KSQMRTDFLS QAERGVAGRE ITVMHGSGSP RMTNDGILLG 180
  181 SFQKPTYDSR APPDQRDPDQ PEDTRRQPEI RFAGTVKKSD GLGLDAIKLP RSDEEHIAIL 240
  241 ERQRNRDDEV LRIPGPRDME RGAKPRRVDD SAEEDDREPA QRAPMVTLNG RAQAITIEEP 300
  301 DRNKLYETLT EDFVDDAKMF THSFVPQLNH LKFRKNTRAP TRNRGDEEAD PKLQRSNSRM 360
  361 SRRPSLSAMR SAFTKDKMEP TPYLSWEPTL GRNSQFHDLT EEQREELGGI EYRVLKLLQK 420
  421 IILCYFFGFF LLGLVGLLPW ILHEDRWGQV VDQAGQSRVW WAFFTANSAF MDLGLTLTPD 480
  481 SMNSFNTAVW PLLLMIFLII IGNTGFPVML RFIIWVMSIV VPRDSGLYEE VRFLLDHPRR 540
  541 CFILLFPSGA TWWLFFILIG LNCADVVFFV VLDLGSGPVD ALPGGIKVLN GLFEAASTRT 600
  601 AGFSCINLAV LHPAVKVSYM IMMYISVLPI AMSIRRTNVY EEKSLGIYNN PEGEEESASP 660
  661 SSDLSYIGSH LRRQLSFDLW FIALFFFMLA ISEGTRIMDG ETDMFALMFE VISAYGTVGM 720
  721 SLGFSTGNAS LSAIFSTTGK VFIIMTLIRG RHRGLPYGLD RAIVLPKELN SSSSEDDGVE 780
  781 RQRSHTSAMS TGRDAWSTTS RTSRRRHWRQ RSNDIGNQIF GALLHPGPPR AAMPLDGHRP 840
  841 HHVPHAQTWH PVHFGSVGKA RPLNRDSHHG SVGSQGVTGL GGGGGGNGVG SGGGDGINPN 900
  901 GWHSMRRRAT NPEQHREETI HEGFPFPSDS DRRPESDQNT LTDPPRLGVG VDHNLKLMKR 960
  961 KSEPSFPSTP TDFSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle