YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32411643, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METAEEPMTP FGTFTAQSNK LQRQYQALLD QSTPYVTYRW VGTGVALFLF FVRVFVAQGW  60
   61 YIVAYALGIY LLNLFLAFLT PKFDPSSDAL DTEMEDGSVG TLPTKQDEEF RPFIRRLPEF 120
  121 KFWHSATRAV AISFLCSWFE IFNIPVFWPV LVMYWLMLFI LTMRKQIQHM IKYRYVPFTI 180
  181 GKARYNKNSN

Type	Start	End	Confidence
Cytoplasmic	1	35	0.82
Transmembrane Helix	36	56	0.84
Non-Cytoplasmic	57	60	0.62
Transmembrane Helix	61	80	0.89
Cytoplasmic	81	119	0.78
Transmembrane Helix	120	139	0.73
Non-Cytoplasmic	140	145	0.58
Transmembrane Helix	146	164	0.90
Cytoplasmic	165	190	0.93