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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28923841, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVADKVRH LDVLIDRIVG LEPGSTQDAE HDQQETGLLT AVSEPPSPRA DELLRIARIL  60
   61 STASRSGTFL PPSRIKQLLE DSVLATEKEL AQQGEVGVES QYERDIEWLL VAKATVQTYG 120
  121 ILMNTFFDQI MPLSDEIWYW DDVLSSYLKS CLYATQIAPA KAWSRAKEVY DVVCEHIRNI 180
  181 HLQQQSEIEA AQAGASLSEG MSQKWSQFYS IVRQSMDETS VSNLRRKVLS PVDLCRAEAR 240
  241 RKRAELQKLR ETIAAALGIL VDEGLAFDRK AEEDKGLESR LMVADSTLVD SIALMHAILT 300
  301 NSVETNEPLS VFEDSVFKVA RDVRNAFSTT DSSKPKASSV AERLIQILDH NLLQHKTAVA 360
  361 KHVSENGRPS RVVRYWLPTL ALLVSSPTIL YVLVKRRDSI IDWIQNLGIT VRDFWFNWVI 420
  421 EPIRKVIGTI RHDTNSEIAI MSRDSLKADR ESLERMVVEF TLDNPSVAVG SPNVTDLQIA 480
  481 DIRAKVREGD VTPILKAYEK GLRRPLVGAV SGDLVRSLLI QVQKTKVDLE VAISGIDSLL 540
  541 KSQELLFGFV GLAPGVVVSI GIVQYLRTVF GSRKGLRRGE KVRRIVRVLR NMDRILAAGA 600
  601 TNPKGGLKYK DRGLLLCEAH VLRELATEVL PGDIRREFLE DLEDLTSVKN VVLQEKALQR 660
  661 IRWAYADWLG KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle