YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32411521, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSSTISDI VGAPLQLVWG LYDVAAETST PTLFLIAVSV AGLAFGLIYI VLHIVAPKPR  60
   61 LPYPSEKTYI TTNPDGTISK PRPLPCWYDR WHAESRLKEQ SSSSTTVSYP TIPAGFPVPD 120
  121 FGTVEPAEVE ISVVIPAYNE ADRLIPTLEE MVAYLDEHFG RPAISGPGSR PTSKGTGTPK 180
  181 PHRNVFKDAS AHKRQHPPSG YEILLINDGS TDRTVDVALD FSRQHNLHDI LRIVTLEKNR 240
  241 GKGGGVTHGL RHVRGEYAVF ADADGASRFG DLGKLIEGCE DVVDGSNRGV AIGSRAHLVG 300
  301 SEAVVKRSAV RNFLMRSFHF VLMILTPPAT SRIRDTQCGF KLFSRAALPH IVPYMHTEGW 360
  361 IFDIEMLMLA ESAPATPVLA SDGSVIGTSY GIKVAEVPIG WHEVGGSKMN LVKDSVKMAI 420
  421 GLAVLRASWM LGVYRRRLA

Type	Start	End	Confidence
Cytoplasmic	1	32	0.51
Transmembrane Helix	33	56	0.89
Non-Cytoplasmic	57	439	0.61