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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28924180, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATPAVLRA SACSACRFSA LRLFVSSFAS PRAPLPVART RVLSPTAPYS TFRPSPRLLA  60
   61 SPSSEEHAEP AAQEQPNKTE DAQAEASTEA NNEGGADVPW YLQVDAPTHP TLVHEPPPLP 120
  121 DIPEGSPKLM EPLVKFVSDE LGMDDLKLLD LREIDPPPAL GPEVLMLFGT ARSERHLHVS 180
  181 ADRLVRWLRN RGVTAKADGL LGRNELKTKL RRKARKAKLL GTTGLPSGAD DGITTGWICV 240
  241 NLGTLGWSDM EMEFKDEKGV TSGFGVPQSG TTLVVQLMTE TRREELALEK LWSGILRRSL 300
  301 ERQDKIAGKL PEASFTTSPD TVSGQSFSPS PIRSSGRNRK RPDRLYFSTS ARQHAAAVDV 360
  361 SQTDLATAMA GWEYSNASPS TIDNLLAQDT DSKVQLLIQM QEYLSSLPRD QALSAVSLCE 420
  421 DGSPSTFMRL FNRAIENLPS AQAWEARLWV EKAARALQHP DHDLARLGDL IQEMKLSGAA 480
  481 NVSREKFVDL LRMIFAIPET TDAGVRQQAS LSMDVIDMLF SRGEKVIEYD VVVAVIESLL 540
  541 QTRARPPEAR RLLSQFEDLL SEAQMDCPTE DEIIRLLDVY ANHRAWDKFW NVWRVFPRHC 600
  601 ERRTERMYTK VYERIAAEDH QGMATDALRW CVEEMWHEQP PVRVTAAMLK ALEACIRIAD 660
  661 PEAESLAKDI DDRISDAQYM DREFVRLWLT LHGSAAWGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle