YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32411097, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVAPEFTL EAFADPASVR DVVRGILHTI FFLRYFVSHE PKTRDVCGLE LAYIPDAEIE  60
   61 TLIDQRVATL VRQLEVDRNQ SSSSQHPYGG GGPGYSGGGG GRGQITVQFF EKKRRKTWYG 120
  121 MGRGDDEVCW ENWTVKVTVA EPRTESVRNA MESTLQSTVF KCITIANTHK DHIPPITTND 180
  181 SNPFTYQIHV NPHHGLHVTS QQHLQSASSK EAAARSDFGS SGNGGSSSGT GGSGRGAGRG 240
  241 GAGGLAGAAG GAAAAVVGSW ATRMGIY

Type	Start	End	Confidence
Cytoplasmic	1	239	0.74
Transmembrane Helix	240	262	0.82
Non-Cytoplasmic	263	267	0.73