YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45443434, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPNRRLSMQ ILLANPRGFC AGVDRAISIV ERAIEMYGAP IYVRHEVVHN RYVVESLCER  60
   61 GAIFIEEISE VPDGSILIFS AHGVSQAVRA EARSRNLTML FDATCPLVTK VHMEVARASR 120
  121 KGKEAILIGH AGHPEVEGTM GQYSNPNGGM YLVESPDDVW QLNVKDENNL CFMTQTTLSV 180
  181 DDTSAVIDAL NTRFPKIVGP RKDDICYATT NRQEAVRNLA NDADIVLVVG SKNSSNSNRL 240
  241 AELVQRMGKP AYLIDSAADI QEFWLQGAKC IGVTAGASAP DILVQQVIAR LKDLGAGESI 300
  301 ELSGREENIV FEVPKELRVE VKQID

Type	Start	End	Confidence
Signal Peptide	1	20	0.78
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	325	0.99