YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21957174, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGWFMSANT EAPGSGRGLE TAKWLIVAVL LVVAIVGNYY YREYSLPLRA LAVVVIIAVA  60
   61 GAVALMTAKG KATVAFAREA RTEVRKVIWP TRQETLHTTL IVAAVTAVMS LILWGLDGIL 120
  121 VRLVSFITGL RF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.82
Transmembrane Helix	21	41	0.95
Non-Cytoplasmic	42	47	0.72
Transmembrane Helix	48	68	0.93
Cytoplasmic	69	94	0.78
Transmembrane Helix	95	116	0.90
Non-Cytoplasmic	117	132	0.73