YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45437366, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGENGRKYIH ISGYAGLRRI ITGTRYGASH PQMLSMGIGQ QGLSSNIVKG LKFCILFSIG  60
   61 YRTIEGIFKD EYTLAEFIGN ITMDMAKIAI VAATSFIVGV LFTATVLAGG SIIVVAGVAF 120
  121 AVGFVATAIL DHFDEKYGIS EKLIALLTKE MRKKPRTQEA NFQSILNGLG RLK

Type	Start	End	Confidence
Cytoplasmic	1	85	0.89
Transmembrane Helix	86	107	0.84
Non-Cytoplasmic	108	111	0.60
Transmembrane Helix	112	133	0.85
Cytoplasmic	134	173	0.86