YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45442459, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITSSNKFL MVLLTSIQKQ VNNCVVSAWQ QVFFMFTMVT PKSMTGRAIL PQLDEHYLVI  60
   61 TALGADRPGI VNTITRHVSS CGCNIEDSRL AMFGEEFTFI MLLSGSWNAV TLLESTLPQK 120
  121 GAELDLLIVM KRTNAQGQKA MPTTVWVKVE VNDSPHIIER FTNLFHCHNM NIAELVSKTQ 180
  181 PADGETPPLL HIQMSAHSPA SQNSSIIEHD FYQLCTELNA QGSISVVSYP QHDDRMES

Type	Start	End	Confidence
Signal Peptide	1	19	0.54
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	238	0.96