YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45442180, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQFSMKRLI IGISGASGAI YGVRLLQVLQ HVEGVETHLI ISNAARQTLA LETDYSVKDV  60
   61 QEFADVVHDF RDIAACISSG SFKTDGMVIL PCSIKTLSGI VHSYTDGLLT RAADVILKER 120
  121 RRLVLCVRET PLHLGHLRLM VQAAELGAVI MPPMLAFYHQ PQTIQDIIDQ TVNRIIDQFD 180
  181 IELPKDLFTR WQGKN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.44
Transmembrane Helix	9	23	0.47
Non-Cytoplasmic	24	195	0.94