YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45436856, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPMKGYLWG GASVVLVTVA QLVLKWGMMN IPLLSLADIN VQFLTMYFVQ LASVMCGLMG  60
   61 YALSMLCWFF ALRYLPLNRA YPLLSLSYAL VYLGAVLLPW FNEPATLLKT LGAGFILLGI 120
  121 WLINIKPIKA S

Type	Start	End	Confidence
Cytoplasmic	1	6	0.94
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	47	0.90
Transmembrane Helix	48	70	0.93
Cytoplasmic	71	79	0.81
Transmembrane Helix	80	100	0.92
Non-Cytoplasmic	101	105	0.82
Transmembrane Helix	106	125	0.94
Cytoplasmic	126	131	0.88