YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21959393, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIFQPQLGF WRFILCTPSQ VVHLTGSDRG SCCQYRIWLV VDDSSPHRLR DTYMFIRKVR  60
   61 SSCRMLSALI VLFVGLSSQQ ALAHAHLKAE TPAADTTINA APEALTLGFS EGIELNFSGV 120
  121 KVTGPDNNVV KTGDLKLDPA NNTQLILPIG HALAAGKYHV SWHVVSVDGH KTKGTYSFTV 180
  181 K

Type	Start	End	Confidence
Cytoplasmic	1	62	0.59
Transmembrane Helix	63	83	0.54
Non-Cytoplasmic	84	181	0.96