YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22126334, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSGSYYMS IWFFRRTALH AALLSLPVFA ISAQAADIQQ VKITVNDKQC EPMALTVPAG  60
   61 KTQFIVHNVS QKGLEWEILK GVMVVEEREN IAPGFTQKMT ANLEPGEYDM TCGLLSNPKG 120
  121 KLTVTVAAGE QAPVKPDAMA LVGPIAEYKV YVTQEVAQLV SQTKAFTDAV KAGDLALARK 180
  181 LYAPTRQHYE RIEPIAELFS DLDGSIDARE DDFEQKSADP KFTGFHRLEK ILFGDNTTKG 240
  241 ADKFADLLYQ DTLELQKRIA GLTFAPNKVV GGAAGLIEEV AASKISGEED RYSRTDLWDF 300
  301 QANVDGAQKI VNLLRPLLEK ADKPLLQKID ANFNTVDSVL AKYRTKEGYE SYEKLTDADR 360
  361 NAMKGPITAL AEDLAQLRGV LGLD

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	384	0.99