YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22126611, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFAISCSS YTYCYKTGTL VRIFTKGVVM KIMSEKRIAQ AQVRFGFLGQ ITIRSQFGGY  60
   61 GLLVNSIMFA VVSEGELYLR ANDNIEDLFR ASGMANLVYA KRGLPVLLRY YRVDTSLWND 120
  121 GLRLHHFVRQ AYEGAKIDVL SKKGPVVRLK DLPNLSASLE RLLWKVGIKN ATELRLEGAK 180
  181 CCYLKLRALR RSLGINILLA LAGAISGYHY AALPLMMRSE LIEWFEKHIH PAKAPLYETA 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	192	0.88
Transmembrane Helix	193	212	0.93
Non-Cytoplasmic	213	240	0.91