YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45440541, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIIMGKIAL LFAMIICLPA ASFTSSASEP VAVSKELKQQ LLGSSVYIQI FKEERVLELY  60
   61 AKLQGEYRLV QSYPICEFSG GLGPKRREGD FKSPEGFYRI NTRHLKPDSQ FYRAINIGFP 120
  121 NDYDKSQGYS GKYLMIHGAC KSIGCYAMTD AYMDEIFNYV RTAFIFGQEK VDISIYPFRM 180
  181 TEQNIQRHRN SSYSNFWRQL QPGYTYFAKN RMPPPVSVSN GQYVLSPPPL TSTPTSQLAL 240
  241 IKTDPLTKTE

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	250	0.99