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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|167420745, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRRVDYSTF MSDVTQDQVR EARINGREIN  60
   61 VSKKDNSKYT TFIPVNDPKL LDTLLTKNVK VVGEPPEEQS LLASIFISWF PMLLLIGVWI 120
  121 FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTSFADVAGC DEAKEEVSEL VDYLREPSRF 180
  181 QKLGGKIPKG VLMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF 240
  241 EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT 300
  301 NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLDTDIDAS VIARGTPGFS 360
  361 GADLANLVNE AALFAARGNK RVVSMVEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG 420
  421 HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE 480
  481 IIYGPEKVST GASNDIKVAT SIARNMVTQW GFSEKLGPLL YAEEEGEIFL GRSVAKAKHM 540
  541 SDETARIIDQ EVKLLVERNY QRARKLLLEN MDVLHSMKDA LMKYETIDAP QIDDLMNRKE 600
  601 VRPPAGWDNV TKNKSSDNDN TPTATMPADE PNTPTSGNTV SEQLGDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle