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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85090897
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQSQQLNG HAPESHQHPN GNAETTPLLS TDLQQQHEGK DASAPPQSAK SPSASKELYP  60
   61 MSNWKYDTFL WTMSFLVDTF FREVHPRGSW KVPRSGPVLF VAAPHANQFV DALVLQRTLR 120
  121 NEAKRRVSLL IAQKSVKGFI GWASRQVGSV PVGRPQDSAK PAEGTIYLPD PIDDPTLIRG 180
  181 VGTNFEKQAE VGGIIFLPSI KGQSGSNVEI VEIHGPEEIR IKRPVNSKLA LYQLTGRDDI 240
  241 DEHGELQNKE VKGIKDGYQG TKFKIAPHID QTKVYQAVFD RLKNGGCVGI FPEGGSHDRS 300
  301 ELLPLKAGVA IMALGTLAEA PDCGLKIVPV GMNYFHPHKF RSRAVLEFGA PFEVPKELVE 360
  361 MYGIKDKRRA AISKLLDMVH QSLSAVTVSA PDYDTLMVIQ AARRLYNPAG KKLPLPIVVE 420
  421 LNRRLALGYD KYKDDPRIIE LQKSVAEYNK QLRYLNIRDH QVQYAKLSWP KVVITFFYRV 480
  481 AKLLVLSAGV LPGLILFAPV FIATKRISHQ KAKEALAGST VKIQGKDVIA TWKMLVAMAV 540
  541 APILYNLYTC LLAYMVGKHR LWGYVPEWVP IWLVYFFGWV FFPAITFAAL RFGEVGMDIL 600
  601 KSLRPLALCI SPTSSYSLQS LKQRREELSA QVTHLINTLG PEMFPDFEHI RLVAADGSSR 660
  661 IHADGTVSPT QPFKRRDSGV SSPPISTPGI STPGTESPHG LRRTGTTSSS RNIPRNESFS 720
  721 NIGQVPMFAT RPPSRSRSRS SSAGGGGGNV QFGGPLGGSP VDKFPNLNTE EGFNEASKKI 780
  781 REAMRERGEM RRRKSQGKVY TFSEQSVDEE VEDEVSTGSS VDEDGKKHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle