YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28919946, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANILDSEAG TELFKHYETE YQLVQADLVQ KLDQISELTG EPRKAALSTA ERALEEAGEL  60
   61 LDQMNMEKQN VPSSSRTAIN KRLRDYRSDV DKYRRKLQTL ATDRSALFGG RYTDNPGSSS 120
  121 GDRHFEQRQQ LLSGTDRLDR STQRLKASQA LAAETEAIGA STLADLHRQR EVIEHTTTIL 180
  181 YESEGYVDRS VKTLKGMARR MATNRIITIA IITVLVLLII AVIVSKFR

Type	Start	End	Confidence
Cytoplasmic	1	203	0.95
Transmembrane Helix	204	224	0.94
Non-Cytoplasmic	225	228	0.78