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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42525094, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDESGSMHV LAAGCIILGL LFSSSVFATS TTSLIDEAKS LAGTDPRKAL HLLSLIENSA  60
   61 AKNEPLLLAE KDLLKCEILV DNDDPKEALK STSPYLGHAS LPPDVLMNLE LCHFSALEAS 120
  121 GQATKAMEGL TYLLEKSRQL HLPAQQGKAH LNMGQLLSYQ NQFSESLKHL LQAKEIFKKL 180
  181 QDSNEERITL NSIAVLYGRM GEHERALEYF GEVLQKNRDL KKTRNVAVVL YNMGRRYEDL 240
  241 NQFEKSREHF AESLKIHREL GNTKSIAVVE RALGGLYNSM NQPLKALEHL KTAVTTLEGM 300
  301 NLPKSLGQLY FELGRTYAKL GDNKQALLNL KKAHGLNSNP NSVQLAADIF SEESRIYQGS 360
  361 GQWKQAYTAL EGFKKYSDQM HLIRADEQLR QLNFKFDLSK KEEANRILKA QNQSQERQLK 420
  421 DAHRIQRLQL MSLSLVVLLL SVTAIFTIRQ VRTARRMREL AMTDELTRIP NRRHVLEYAQ 480
  481 QSISTCQRQG KSMSVVIFDI DHFKRINDTF GHAVGDEVIK RVAEIGKMAL RKGDMIGRIG 540
  541 GEEFLLILPF TEPLPAKEVA ERLRREISLY DFTDLAPNLT VTVSAGVSCY TATDKQGHID 600
  601 SLIQQADEAL YSVKQNGRNG VSLRLVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle